Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 PCDHA3-202ENST00000532566 4594 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 MRPL37P1-201ENST00000592451 1337 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 TMBIM7P-202ENST00000641474 1516 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.28□□□□□ -0.28
FREM3P0C091 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 AC125604.1-201ENST00000496255 707 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 AC106794.1-201ENST00000506935 792 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.28□□□□□ -0.28
FREM3P0C091 AL157813.1-201ENST00000612996 587 ntBASIC13.28□□□□□ -0.28
FREM3P0C091 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
FREM3P0C091 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.28□□□□□ -0.28
FREM3P0C091 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.28□□□□□ -0.28
FREM3P0C091 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FREM3P0C091 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
FREM3P0C091 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.27□□□□□ -0.28
FREM3P0C091 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
FREM3P0C091 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
FREM3P0C091 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.27□□□□□ -0.28
FREM3P0C091 AL353637.1-201ENST00000451571 732 ntBASIC13.27□□□□□ -0.28
FREM3P0C091 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.27□□□□□ -0.28
FREM3P0C091 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.27□□□□□ -0.28
FREM3P0C091 AC138627.1-207ENST00000641560 1006 ntBASIC13.27□□□□□ -0.28
FREM3P0C091 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FREM3P0C091 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FREM3P0C091 AC015688.4-201ENST00000580780 1647 ntBASIC13.27□□□□□ -0.28
FREM3P0C091 AC041040.2-201ENST00000622926 2899 ntBASIC13.27□□□□□ -0.29
FREM3P0C091 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
FREM3P0C091 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
FREM3P0C091 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
FREM3P0C091 AC008132.1-202ENST00000342005 1389 ntBASIC13.27□□□□□ -0.29
FREM3P0C091 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
FREM3P0C091 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.27□□□□□ -0.29
FREM3P0C091 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 AC092135.3-201ENST00000624151 1846 ntBASIC13.27□□□□□ -0.29
FREM3P0C091 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.27□□□□□ -0.29
FREM3P0C091 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
FREM3P0C091 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
FREM3P0C091 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
FREM3P0C091 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.27□□□□□ -0.29
FREM3P0C091 OR2R1P-201ENST00000441404 914 ntBASIC13.27□□□□□ -0.29
FREM3P0C091 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.27□□□□□ -0.29
FREM3P0C091 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FREM3P0C091 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms