Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC6P09630 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC6P09630 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC6P09630 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 AC098934.1-203ENST00000442868 1262 ntBASIC16.34■□□□□ 0.21
HOXC6P09630 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC6P09630 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC6P09630 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 RN7SL396P-201ENST00000471086 295 ntBASIC16.34■□□□□ 0.21
HOXC6P09630 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 RN7SL357P-201ENST00000581065 298 ntBASIC16.34■□□□□ 0.21
HOXC6P09630 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC6P09630 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC6P09630 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 AL451007.2-201ENST00000632004 563 ntBASIC16.34■□□□□ 0.21
HOXC6P09630 AC002472.4-201ENST00000641915 272 ntBASIC16.34■□□□□ 0.21
HOXC6P09630 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HOXC6P09630 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC6P09630 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC6P09630 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HOXC6P09630 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.33■□□□□ 0.21
HOXC6P09630 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.33■□□□□ 0.21
HOXC6P09630 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.33■□□□□ 0.21
HOXC6P09630 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC6P09630 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.33■□□□□ 0.21
HOXC6P09630 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HOXC6P09630 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC6P09630 AQP7P5-201ENST00000428759 1049 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 AQP7P4-201ENST00000447083 1042 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 AQP7P2-201ENST00000453967 1041 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 RN7SL596P-201ENST00000582123 288 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXC6P09630 AC021016.3-201ENST00000608367 477 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 AQP7P3-201ENST00000624547 1041 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 AC002044.2-201ENST00000624910 970 ntBASIC16.33■□□□□ 0.2
HOXC6P09630 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXC6P09630 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXC6P09630 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HOXC6P09630 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC6P09630 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXC6P09630 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC6P09630 AC011270.2-201ENST00000624293 2550 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms