Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM3P06753 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM3P06753 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TPM3P06753 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM3P06753 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.5■□□□□ 0.23
TPM3P06753 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
TPM3P06753 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 AC073592.8-201ENST00000624126 511 ntBASIC16.5■□□□□ 0.23
TPM3P06753 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TPM3P06753 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 AC072061.1-201ENST00000569710 2234 ntBASIC16.5■□□□□ 0.23
TPM3P06753 AL023775.1-201ENST00000454907 1746 ntBASIC16.5■□□□□ 0.23
TPM3P06753 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM3P06753 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TPM3P06753 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM3P06753 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM3P06753 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM3P06753 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM3P06753 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TPM3P06753 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TPM3P06753 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TPM3P06753 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM3P06753 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM3P06753 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 ZNF890P-202ENST00000530367 1156 ntBASIC16.49■□□□□ 0.23
TPM3P06753 AC092337.1-201ENST00000568699 1129 ntBASIC16.49■□□□□ 0.23
TPM3P06753 AC092364.2-202ENST00000597012 1073 ntBASIC16.49■□□□□ 0.23
TPM3P06753 AL596442.2-201ENST00000610240 980 ntBASIC16.49■□□□□ 0.23
TPM3P06753 AL158212.4-201ENST00000624062 1286 ntBASIC16.49■□□□□ 0.23
TPM3P06753 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TPM3P06753 AL138799.1-201ENST00000448213 1675 ntBASIC16.49■□□□□ 0.23
TPM3P06753 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM3P06753 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TPM3P06753 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TPM3P06753 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM3P06753 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 AC087499.5-201ENST00000452760 1342 ntBASIC16.48■□□□□ 0.23
TPM3P06753 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms