Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RB1P06400 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.32■□□□□ 0.04
RB1P06400 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 AC025183.3-201ENST00000623526 1482 ntBASIC15.32■□□□□ 0.04
RB1P06400 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RB1P06400 AL672207.1-201ENST00000328462 1570 ntBASIC15.32■□□□□ 0.04
RB1P06400 AC006504.5-208ENST00000588784 2401 ntBASIC15.32■□□□□ 0.04
RB1P06400 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
RB1P06400 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
RB1P06400 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 AGGF1P1-201ENST00000509500 2073 ntBASIC15.31■□□□□ 0.04
RB1P06400 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.31■□□□□ 0.04
RB1P06400 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.31■□□□□ 0.04
RB1P06400 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.31■□□□□ 0.04
RB1P06400 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.31■□□□□ 0.04
RB1P06400 AC063926.3-201ENST00000624734 5658 ntBASIC15.31■□□□□ 0.04
RB1P06400 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
RB1P06400 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RB1P06400 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RB1P06400 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RB1P06400 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RB1P06400 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RB1P06400 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 COX20P1-201ENST00000366529 357 ntBASIC15.3■□□□□ 0.04
RB1P06400 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.3■□□□□ 0.04
RB1P06400 DDX39AP1-201ENST00000445147 1181 ntBASIC15.3■□□□□ 0.04
RB1P06400 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 LAP3P2-201ENST00000454686 1454 ntBASIC15.3■□□□□ 0.04
RB1P06400 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.3■□□□□ 0.04
RB1P06400 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.3■□□□□ 0.04
RB1P06400 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.3■□□□□ 0.04
RB1P06400 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RB1P06400 AL118522.1-201ENST00000611368 560 ntBASIC15.3■□□□□ 0.04
RB1P06400 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RB1P06400 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RB1P06400 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms