Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.69■□□□□ 0.58
COL5A2P05997 AC025594.1-201ENST00000469533 543 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC18.69■□□□□ 0.58
COL5A2P05997 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 FBXO36P1-201ENST00000579006 471 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 AL049840.2-201ENST00000602722 535 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC18.69■□□□□ 0.58
COL5A2P05997 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.69■□□□□ 0.58
COL5A2P05997 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC18.69■□□□□ 0.58
COL5A2P05997 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL5A2P05997 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 SIRPB3P-201ENST00000340424 1216 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 CTSL-202ENST00000342020 933 ntTSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL5A2P05997 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 AL157823.1-201ENST00000403727 628 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.68■□□□□ 0.58
COL5A2P05997 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 RN7SL351P-201ENST00000469306 248 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 AC113347.2-201ENST00000512350 279 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 ANKRD26P1-203ENST00000569528 966 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.68■□□□□ 0.58
COL5A2P05997 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.68■□□□□ 0.58
COL5A2P05997 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL5A2P05997 AC015909.5-201ENST00000624336 2266 ntBASIC18.68■□□□□ 0.58
COL5A2P05997 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.68■□□□□ 0.58
COL5A2P05997 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.67■□□□□ 0.58
COL5A2P05997 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.67■□□□□ 0.58
COL5A2P05997 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 ACTBP14-201ENST00000411655 1089 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 AC027612.2-202ENST00000445955 1199 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 HIST1H2APS2-201ENST00000454426 370 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC18.67■□□□□ 0.58
COL5A2P05997 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC18.67■□□□□ 0.58
COL5A2P05997 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL5A2P05997 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC18.67■□□□□ 0.58
COL5A2P05997 PRMT1P1-201ENST00000604252 1009 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 AL591424.3-201ENST00000614278 872 ntBASIC18.67■□□□□ 0.58
COL5A2P05997 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
COL5A2P05997 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL5A2P05997 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COL5A2P05997 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.67■□□□□ 0.58
COL5A2P05997 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL5A2P05997 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
COL5A2P05997 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COL5A2P05997 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.66■□□□□ 0.58
COL5A2P05997 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 AC136604.1-202ENST00000425471 771 ntBASIC18.66■□□□□ 0.58
COL5A2P05997 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC18.66■□□□□ 0.58
COL5A2P05997 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms