Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 AL022313.4-201ENST00000562756 2046 ntBASIC17.48■□□□□ 0.39
CHGBP05060 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.48■□□□□ 0.39
CHGBP05060 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 AC099063.4-201ENST00000641099 1602 ntBASIC17.48■□□□□ 0.39
CHGBP05060 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CHGBP05060 AC078875.1-201ENST00000431907 724 ntBASIC17.48■□□□□ 0.39
CHGBP05060 XBP1P1-201ENST00000436573 652 ntBASIC17.48■□□□□ 0.39
CHGBP05060 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 AC106794.1-201ENST00000506935 792 ntBASIC17.48■□□□□ 0.39
CHGBP05060 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 PGAM1P5-201ENST00000548011 764 ntBASIC17.48■□□□□ 0.39
CHGBP05060 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 AC244452.3-201ENST00000636814 210 ntBASIC17.48■□□□□ 0.39
CHGBP05060 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 AC008132.1-202ENST00000342005 1389 ntBASIC17.48■□□□□ 0.39
CHGBP05060 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.48■□□□□ 0.39
CHGBP05060 AC005089.1-201ENST00000619486 2241 ntBASIC17.48■□□□□ 0.39
CHGBP05060 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHGBP05060 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
CHGBP05060 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.47■□□□□ 0.39
CHGBP05060 LINC01165-201ENST00000445190 1623 ntBASIC17.47■□□□□ 0.39
CHGBP05060 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 AC152010.1-201ENST00000415779 2006 ntBASIC17.47■□□□□ 0.39
CHGBP05060 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 CALR4P-201ENST00000431943 946 ntBASIC17.47■□□□□ 0.39
CHGBP05060 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.47■□□□□ 0.39
CHGBP05060 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.47■□□□□ 0.39
CHGBP05060 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.47■□□□□ 0.39
CHGBP05060 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHGBP05060 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.47■□□□□ 0.39
CHGBP05060 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.47■□□□□ 0.39
CHGBP05060 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHGBP05060 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 258 ms