Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
CD74P04233 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 AC093813.1-201ENST00000605066 256 ntBASIC12.35□□□□□ -0.43
CD74P04233 AL138828.2-201ENST00000615812 383 ntBASIC12.35□□□□□ -0.43
CD74P04233 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
CD74P04233 BX539320.1-201ENST00000623759 877 ntBASIC12.35□□□□□ -0.43
CD74P04233 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 AP000437.1-201ENST00000624057 2085 ntBASIC12.34□□□□□ -0.43
CD74P04233 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CD74P04233 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 AL139400.1-201ENST00000366220 510 ntBASIC12.34□□□□□ -0.43
CD74P04233 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 AC004835.2-201ENST00000603762 682 ntBASIC12.34□□□□□ -0.43
CD74P04233 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 AC023511.2-201ENST00000618803 211 ntBASIC12.34□□□□□ -0.43
CD74P04233 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CD74P04233 AL355102.3-201ENST00000554299 1678 ntBASIC12.34□□□□□ -0.43
CD74P04233 DLX4-206ENST00000611342 1662 ntBASIC12.34□□□□□ -0.43
CD74P04233 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.34□□□□□ -0.43
CD74P04233 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.34□□□□□ -0.43
CD74P04233 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD74P04233 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD74P04233 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD74P04233 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD74P04233 AL359845.1-201ENST00000458202 1648 ntBASIC12.33□□□□□ -0.43
CD74P04233 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD74P04233 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 PCDHB18P-202ENST00000526308 3197 ntBASIC12.33□□□□□ -0.44
CD74P04233 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 AC073869.1-201ENST00000415574 2762 ntBASIC12.33□□□□□ -0.44
CD74P04233 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms