Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 DUX4L47-201ENST00000566374 394 ntBASIC12.67□□□□□ -0.38
HLA-DQB1P01920 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 AL671883.3-201ENST00000603274 991 ntBASIC12.67□□□□□ -0.38
HLA-DQB1P01920 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DQB1P01920 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PI4KAP2-201ENST00000360806 2080 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 GHET1-201ENST00000627071 1906 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AC015688.4-201ENST00000580780 1647 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AL512361.1-201ENST00000554200 418 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MIR3687-2-201ENST00000577708 61 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MIR3687-1-201ENST00000614492 61 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AC004461.2-201ENST00000629517 803 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 AL136172.1-201ENST00000598590 1394 ntBASIC12.66□□□□□ -0.38
HLA-DQB1P01920 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DQB1P01920 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms