Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.47□□□□□ -0.09
PDGFBP01127 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 AC019109.1-201ENST00000401725 1874 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 SNORA57-201ENST00000383870 149 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 MAGEA7P-201ENST00000436482 942 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 AC010900.1-201ENST00000449849 1296 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.47□□□□□ -0.09
PDGFBP01127 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.47□□□□□ -0.09
PDGFBP01127 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 AL132994.1-201ENST00000554098 400 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 AL359091.4-201ENST00000610052 409 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 AC092135.3-201ENST00000624151 1846 ntBASIC14.47□□□□□ -0.09
PDGFBP01127 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFBP01127 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFBP01127 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PDGFBP01127 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFBP01127 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PDGFBP01127 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ODCP-201ENST00000459650 1639 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 AL121949.3-201ENST00000406684 385 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFBP01127 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFBP01127 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 RN7SKP155-201ENST00000516031 288 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 CTBP2P6-201ENST00000526402 1229 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ANKRD26P1-203ENST00000569528 966 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.46□□□□□ -0.09
PDGFBP01127 AP005264.5-201ENST00000590066 467 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 AC091769.1-201ENST00000619576 568 ntBASIC14.46□□□□□ -0.09
PDGFBP01127 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.46□□□□□ -0.09
PDGFBP01127 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.46□□□□□ -0.09
PDGFBP01127 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDGFBP01127 LINC01101-201ENST00000622953 1884 ntBASIC14.46□□□□□ -0.1
PDGFBP01127 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
PDGFBP01127 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.46□□□□□ -0.1
PDGFBP01127 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.46□□□□□ -0.1
PDGFBP01127 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFBP01127 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFBP01127 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFBP01127 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDGFBP01127 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms