Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.48□□□□□ -0.25
NKX2-2O95096 BNIP3P29-201ENST00000598302 571 ntBASIC13.48□□□□□ -0.25
NKX2-2O95096 AC009884.2-201ENST00000603110 324 ntBASIC13.48□□□□□ -0.25
NKX2-2O95096 AC239800.4-201ENST00000603712 296 ntBASIC13.48□□□□□ -0.25
NKX2-2O95096 AC011447.5-201ENST00000616168 564 ntBASIC13.48□□□□□ -0.25
NKX2-2O95096 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NKX2-2O95096 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NKX2-2O95096 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.48□□□□□ -0.25
NKX2-2O95096 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.48□□□□□ -0.25
NKX2-2O95096 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 AC067750.1-201ENST00000608826 6545 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 MTX1P1-201ENST00000440904 838 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 ST13P19-201ENST00000442505 1124 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 Z93015.1-201ENST00000451718 390 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 RPSAP36-202ENST00000494591 1261 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.47□□□□□ -0.25
NKX2-2O95096 AC009542.2-202ENST00000619004 1067 ntBASIC13.47□□□□□ -0.25
NKX2-2O95096 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-2O95096 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-2O95096 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-2O95096 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-2O95096 KRT8P24-201ENST00000560290 1559 ntBASIC13.46□□□□□ -0.25
NKX2-2O95096 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NKX2-2O95096 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-2O95096 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms