Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC18.8■□□□□ 0.6
LTN1O94822 AL160191.2-201ENST00000603975 601 ntBASIC18.8■□□□□ 0.6
LTN1O94822 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.8■□□□□ 0.6
LTN1O94822 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.8■□□□□ 0.6
LTN1O94822 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LTN1O94822 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LTN1O94822 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.79■□□□□ 0.6
LTN1O94822 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 OR2W2P-201ENST00000406313 909 ntBASIC18.79■□□□□ 0.6
LTN1O94822 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.79■□□□□ 0.6
LTN1O94822 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.79■□□□□ 0.6
LTN1O94822 RN7SL147P-201ENST00000487345 298 ntBASIC18.79■□□□□ 0.6
LTN1O94822 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.79■□□□□ 0.6
LTN1O94822 GOLGA2P7-209ENST00000560408 745 ntBASIC18.79■□□□□ 0.6
LTN1O94822 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC18.79■□□□□ 0.6
LTN1O94822 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.79■□□□□ 0.6
LTN1O94822 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.79■□□□□ 0.6
LTN1O94822 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LTN1O94822 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.79■□□□□ 0.6
LTN1O94822 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LTN1O94822 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.78■□□□□ 0.6
LTN1O94822 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.78■□□□□ 0.6
LTN1O94822 KRT18P62-201ENST00000446618 1287 ntBASIC18.78■□□□□ 0.6
LTN1O94822 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.78■□□□□ 0.6
LTN1O94822 RN7SL351P-201ENST00000469306 248 ntBASIC18.78■□□□□ 0.6
LTN1O94822 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.78■□□□□ 0.6
LTN1O94822 GOLGA2P8-201ENST00000505201 779 ntBASIC18.78■□□□□ 0.6
LTN1O94822 AC012158.2-201ENST00000536546 354 ntBASIC18.78■□□□□ 0.6
LTN1O94822 CYP4F36P-201ENST00000589193 186 ntBASIC18.78■□□□□ 0.6
LTN1O94822 AL139339.2-201ENST00000608063 657 ntBASIC18.78■□□□□ 0.6
LTN1O94822 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 HTR7P1-202ENST00000624664 4411 ntBASIC18.78■□□□□ 0.6
LTN1O94822 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 CICP24-201ENST00000605464 2705 ntBASIC18.78■□□□□ 0.6
LTN1O94822 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 MIR566-201ENST00000385187 94 ntBASIC18.78■□□□□ 0.6
LTN1O94822 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.78■□□□□ 0.6
LTN1O94822 AC087203.1-201ENST00000532111 1181 ntBASIC18.78■□□□□ 0.6
LTN1O94822 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.78■□□□□ 0.6
LTN1O94822 AC132825.4-202ENST00000578792 434 ntBASIC18.78■□□□□ 0.6
LTN1O94822 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.78■□□□□ 0.6
LTN1O94822 AC026336.4-201ENST00000624565 1050 ntBASIC18.78■□□□□ 0.6
LTN1O94822 TBC1D27-202ENST00000424239 1573 ntBASIC18.78■□□□□ 0.6
LTN1O94822 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LTN1O94822 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.78■□□□□ 0.6
LTN1O94822 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LTN1O94822 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.77■□□□□ 0.6
LTN1O94822 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 AC007952.5-201ENST00000572818 1486 ntBASIC18.77■□□□□ 0.6
LTN1O94822 FKBP4P8-201ENST00000610931 1369 ntBASIC18.77■□□□□ 0.6
LTN1O94822 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.77■□□□□ 0.6
LTN1O94822 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 ACTBP7-201ENST00000418351 1124 ntBASIC18.77■□□□□ 0.6
LTN1O94822 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.77■□□□□ 0.6
LTN1O94822 RN7SL375P-201ENST00000492442 298 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms