Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
NDUFS3O75489 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NDUFS3O75489 KHSRPP1-201ENST00000427983 1768 ntBASIC14.65□□□□□ -0.06
NDUFS3O75489 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFS3O75489 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFS3O75489 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFS3O75489 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.65□□□□□ -0.06
NDUFS3O75489 CROCCP4-201ENST00000457096 498 ntBASIC14.65□□□□□ -0.06
NDUFS3O75489 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFS3O75489 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.65□□□□□ -0.06
NDUFS3O75489 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.65□□□□□ -0.06
NDUFS3O75489 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
NDUFS3O75489 AC073413.1-201ENST00000603927 732 ntBASIC14.65□□□□□ -0.06
NDUFS3O75489 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 GRK6P1-201ENST00000400595 1711 ntBASIC14.65□□□□□ -0.06
NDUFS3O75489 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NDUFS3O75489 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NDUFS3O75489 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NDUFS3O75489 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 KRT8P4-201ENST00000509735 1454 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFS3O75489 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFS3O75489 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFS3O75489 AL136309.1-201ENST00000403917 691 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 BOLA2P3-201ENST00000404566 256 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.64□□□□□ -0.07
NDUFS3O75489 RPL7P3-201ENST00000441388 714 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 AC234783.1-201ENST00000441761 496 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.64□□□□□ -0.07
NDUFS3O75489 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.64□□□□□ -0.07
NDUFS3O75489 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFS3O75489 PDIA3P1-201ENST00000471856 1510 ntBASIC14.64□□□□□ -0.07
NDUFS3O75489 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NDUFS3O75489 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFS3O75489 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFS3O75489 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NDUFS3O75489 AL590440.2-201ENST00000641973 1595 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms