Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
USH2AO75445 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
USH2AO75445 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 CCL19-202ENST00000378800 414 ntTSL 2 BASIC6.31□□□□□ -1.4
USH2AO75445 RPL10-203ENST00000406022 748 ntTSL 3 BASIC6.31□□□□□ -1.4
USH2AO75445 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC6.31□□□□□ -1.4
USH2AO75445 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
USH2AO75445 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC6.31□□□□□ -1.4
USH2AO75445 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC6.31□□□□□ -1.4
USH2AO75445 KF455155.1-201ENST00000604493 303 ntBASIC6.31□□□□□ -1.4
USH2AO75445 AL031768.1-201ENST00000606542 701 ntBASIC6.31□□□□□ -1.4
USH2AO75445 MIR6871-201ENST00000613433 56 ntBASIC6.31□□□□□ -1.4
USH2AO75445 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
USH2AO75445 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USH2AO75445 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC090616.6-203ENST00000579186 1945 ntBASIC6.3□□□□□ -1.4
USH2AO75445 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 LAP3P2-201ENST00000454686 1454 ntBASIC6.3□□□□□ -1.4
USH2AO75445 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USH2AO75445 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 AC105250.1-201ENST00000509378 2057 ntBASIC6.3□□□□□ -1.4
USH2AO75445 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 SNX20-205ENST00000610485 557 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 AC091905.3-201ENST00000624959 234 ntBASIC6.3□□□□□ -1.4
USH2AO75445 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 LINC00265-2P-201ENST00000413372 782 ntBASIC6.3□□□□□ -1.4
USH2AO75445 AC092810.2-201ENST00000431570 362 ntBASIC6.3□□□□□ -1.4
USH2AO75445 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 RN7SL487P-201ENST00000468140 344 ntBASIC6.3□□□□□ -1.4
USH2AO75445 RNA5SP420-201ENST00000516997 137 ntBASIC6.3□□□□□ -1.4
USH2AO75445 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC009779.7-201ENST00000609031 469 ntBASIC6.3□□□□□ -1.4
USH2AO75445 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 F10-203ENST00000409306 1450 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USH2AO75445 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 MGST3-204ENST00000367888 778 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms