Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRCH4O75427 AC090643.2-201ENST00000623442 2029 ntBASIC15.22■□□□□ 0.03
LRCH4O75427 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH4O75427 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRCH4O75427 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LRCH4O75427 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 AL359881.3-201ENST00000602640 1721 ntBASIC15.21■□□□□ 0.03
LRCH4O75427 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.21■□□□□ 0.03
LRCH4O75427 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 AC099336.1-201ENST00000417053 1171 ntBASIC15.21■□□□□ 0.03
LRCH4O75427 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 AL157407.1-201ENST00000435784 904 ntBASIC15.21■□□□□ 0.03
LRCH4O75427 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 AC119751.2-201ENST00000504529 210 ntBASIC15.21■□□□□ 0.03
LRCH4O75427 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LRCH4O75427 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.21■□□□□ 0.03
LRCH4O75427 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.21■□□□□ 0.03
LRCH4O75427 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRCH4O75427 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH4O75427 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRCH4O75427 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRCH4O75427 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRCH4O75427 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRCH4O75427 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.21■□□□□ 0.02
LRCH4O75427 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.21■□□□□ 0.02
LRCH4O75427 AL022313.4-201ENST00000562756 2046 ntBASIC15.21■□□□□ 0.02
LRCH4O75427 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH4O75427 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 TUBB8P4-201ENST00000511806 1324 ntBASIC15.2■□□□□ 0.02
LRCH4O75427 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH4O75427 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRCH4O75427 AC244394.1-201ENST00000435000 1665 ntBASIC15.2■□□□□ 0.02
LRCH4O75427 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.2■□□□□ 0.02
LRCH4O75427 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.2■□□□□ 0.02
LRCH4O75427 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.2■□□□□ 0.02
LRCH4O75427 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.2■□□□□ 0.02
LRCH4O75427 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.2■□□□□ 0.02
LRCH4O75427 HILS1-202ENST00000545329 423 ntBASIC15.2■□□□□ 0.02
LRCH4O75427 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRCH4O75427 MIR6720-201ENST00000611664 98 ntBASIC15.2■□□□□ 0.02
LRCH4O75427 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRCH4O75427 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRCH4O75427 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRCH4O75427 AL008718.2-201ENST00000609206 1313 ntBASIC15.19■□□□□ 0.02
LRCH4O75427 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
LRCH4O75427 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms