Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ZNF253O75346 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.52□□□□□ -0.57
ZNF253O75346 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.52□□□□□ -0.57
ZNF253O75346 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ZNF253O75346 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 BX842568.4-201ENST00000421222 227 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
ZNF253O75346 CNN2P11-201ENST00000429351 262 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 AC112482.1-201ENST00000492080 688 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 AC069120.2-201ENST00000524091 540 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.51□□□□□ -0.57
ZNF253O75346 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.51□□□□□ -0.57
ZNF253O75346 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.51□□□□□ -0.57
ZNF253O75346 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
ZNF253O75346 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ZNF253O75346 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.51□□□□□ -0.57
ZNF253O75346 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ZNF253O75346 BTBD7P1-201ENST00000447253 1453 ntBASIC11.51□□□□□ -0.57
ZNF253O75346 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.5□□□□□ -0.57
ZNF253O75346 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.5□□□□□ -0.57
ZNF253O75346 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ZNF253O75346 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ZNF253O75346 AL139400.1-201ENST00000366220 510 ntBASIC11.5□□□□□ -0.57
ZNF253O75346 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms