Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP2AO43633 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.48■□□□□ 0.23
CHMP2AO43633 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP2AO43633 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 AL160314.3-201ENST00000556041 767 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC013355.1-201ENST00000562625 723 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC005324.6-201ENST00000587972 613 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC090164.2-201ENST00000611487 516 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC138649.2-201ENST00000615886 705 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC244452.3-201ENST00000636814 210 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 AC068587.8-201ENST00000641239 219 ntBASIC16.48■□□□□ 0.23
CHMP2AO43633 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHMP2AO43633 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP2AO43633 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP2AO43633 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHMP2AO43633 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP2AO43633 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHMP2AO43633 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP2AO43633 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CHMP2AO43633 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 AL390755.1-201ENST00000623716 2027 ntBASIC16.47■□□□□ 0.23
CHMP2AO43633 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP2AO43633 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP2AO43633 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHMP2AO43633 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP2AO43633 VDAC1P1-201ENST00000439229 848 ntBASIC16.47■□□□□ 0.23
CHMP2AO43633 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.47■□□□□ 0.23
CHMP2AO43633 HIST2H2BC-201ENST00000498492 580 ntBASIC16.47■□□□□ 0.23
CHMP2AO43633 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.47■□□□□ 0.23
CHMP2AO43633 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP2AO43633 RBM8B-201ENST00000555532 525 ntBASIC16.47■□□□□ 0.23
CHMP2AO43633 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.47■□□□□ 0.23
CHMP2AO43633 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP2AO43633 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHMP2AO43633 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP2AO43633 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP2AO43633 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP2AO43633 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP2AO43633 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 AC009093.10-201ENST00000641956 1442 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP2AO43633 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHMP2AO43633 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP2AO43633 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP2AO43633 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP2AO43633 AC006122.1-201ENST00000493323 440 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 SCARNA20.5-201ENST00000516991 142 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP2AO43633 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP2AO43633 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.46■□□□□ 0.23
CHMP2AO43633 ACTG1P17-201ENST00000558391 1119 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP2AO43633 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP2AO43633 MYADML-201ENST00000474610 2147 ntBASIC16.46■□□□□ 0.23
CHMP2AO43633 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms