Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 AGAP12P-201ENST00000585227 2359 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RIPK2O43353 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 BX842568.4-201ENST00000421222 227 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 AC241585.1-201ENST00000433527 519 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.9□□□□□ -0.02
RIPK2O43353 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 AC023310.3-201ENST00000557027 670 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 AC100756.1-201ENST00000562736 682 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 AC138749.3-201ENST00000567691 622 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.9□□□□□ -0.02
RIPK2O43353 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 AL390955.2-201ENST00000603032 514 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 AC116165.1-201ENST00000611806 668 ntBASIC14.9□□□□□ -0.02
RIPK2O43353 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RIPK2O43353 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.9□□□□□ -0.02
RIPK2O43353 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIPK2O43353 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.89□□□□□ -0.03
RIPK2O43353 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 AC134915.1-201ENST00000426461 574 ntBASIC14.89□□□□□ -0.03
RIPK2O43353 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.89□□□□□ -0.03
RIPK2O43353 SNHG9-202ENST00000564014 471 ntBASIC14.89□□□□□ -0.03
RIPK2O43353 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 AC138696.2-201ENST00000607376 223 ntBASIC14.89□□□□□ -0.03
RIPK2O43353 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms