Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 RNA5SP412-201ENST00000516234 123 ntBASIC15.56■□□□□ 0.08
CAPN9O14815 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.56■□□□□ 0.08
CAPN9O14815 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.56■□□□□ 0.08
CAPN9O14815 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.56■□□□□ 0.08
CAPN9O14815 DUX4L45-201ENST00000566406 1057 ntBASIC15.56■□□□□ 0.08
CAPN9O14815 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 MIR4683-201ENST00000579659 81 ntBASIC15.56■□□□□ 0.08
CAPN9O14815 MIR4741-201ENST00000579822 90 ntBASIC15.56■□□□□ 0.08
CAPN9O14815 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.56■□□□□ 0.08
CAPN9O14815 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 MRPL37P1-201ENST00000592451 1337 ntBASIC15.56■□□□□ 0.08
CAPN9O14815 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN9O14815 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN9O14815 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CAPN9O14815 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.56■□□□□ 0.08
CAPN9O14815 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.56■□□□□ 0.08
CAPN9O14815 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CAPN9O14815 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CAPN9O14815 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CAPN9O14815 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN9O14815 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN9O14815 GCOM2-201ENST00000509133 1104 ntBASIC15.55■□□□□ 0.08
CAPN9O14815 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.55■□□□□ 0.08
CAPN9O14815 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN9O14815 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN9O14815 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN9O14815 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN9O14815 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CAPN9O14815 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN9O14815 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CAPN9O14815 AC010327.5-201ENST00000586923 3061 ntBASIC15.54■□□□□ 0.08
CAPN9O14815 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN9O14815 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
CAPN9O14815 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPN9O14815 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN9O14815 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms