Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UPK2O00526 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
UPK2O00526 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 DGCR5-201ENST00000399539 862 ntBASIC11.78□□□□□ -0.52
UPK2O00526 BCRP1-201ENST00000444246 691 ntBASIC11.78□□□□□ -0.52
UPK2O00526 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.78□□□□□ -0.52
UPK2O00526 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.78□□□□□ -0.52
UPK2O00526 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.78□□□□□ -0.52
UPK2O00526 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 MIR5189-201ENST00000577370 114 ntBASIC11.78□□□□□ -0.52
UPK2O00526 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.78□□□□□ -0.52
UPK2O00526 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 AC132938.4-201ENST00000623835 848 ntBASIC11.78□□□□□ -0.52
UPK2O00526 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
UPK2O00526 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
UPK2O00526 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
UPK2O00526 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UPK2O00526 AC131212.3-201ENST00000624087 4219 ntBASIC11.77□□□□□ -0.52
UPK2O00526 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.77□□□□□ -0.52
UPK2O00526 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.77□□□□□ -0.52
UPK2O00526 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.77□□□□□ -0.52
UPK2O00526 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.77□□□□□ -0.52
UPK2O00526 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.77□□□□□ -0.53
UPK2O00526 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK2O00526 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 ARSEP1-201ENST00000420443 635 ntBASIC11.77□□□□□ -0.53
UPK2O00526 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK2O00526 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.77□□□□□ -0.53
UPK2O00526 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.77□□□□□ -0.53
UPK2O00526 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms