Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXN3O00409 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXN3O00409 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXN3O00409 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXN3O00409 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 AL162274.1-201ENST00000617191 1098 ntBASIC15.68■□□□□ 0.1
FOXN3O00409 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FOXN3O00409 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FOXN3O00409 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
FOXN3O00409 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXN3O00409 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXN3O00409 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXN3O00409 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 BEND3P1-201ENST00000421591 1944 ntBASIC15.67■□□□□ 0.1
FOXN3O00409 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.67■□□□□ 0.1
FOXN3O00409 AL161932.2-201ENST00000435436 679 ntBASIC15.67■□□□□ 0.1
FOXN3O00409 CTBP2P5-201ENST00000454986 1264 ntBASIC15.67■□□□□ 0.1
FOXN3O00409 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXN3O00409 AP006547.1-201ENST00000563435 692 ntBASIC15.67■□□□□ 0.1
FOXN3O00409 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.67■□□□□ 0.1
FOXN3O00409 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXN3O00409 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
FOXN3O00409 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 AC064801.2-201ENST00000625052 1303 ntBASIC15.67■□□□□ 0.1
FOXN3O00409 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXN3O00409 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXN3O00409 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXN3O00409 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXN3O00409 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXN3O00409 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 AL359881.3-201ENST00000602640 1721 ntBASIC15.66■□□□□ 0.1
FOXN3O00409 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FOXN3O00409 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXN3O00409 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXN3O00409 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms