Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AC010327.4-202ENST00000591484 748 ntBASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AC073592.8-201ENST00000624126 511 ntBASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AC079781.4-201ENST00000641908 219 ntBASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 AL355102.3-201ENST00000554299 1678 ntBASIC12.77□□□□□ -0.36
SHISA3A0PJX4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
SHISA3A0PJX4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
SHISA3A0PJX4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 MIR600HG-201ENST00000449175 5984 ntBASIC12.76□□□□□ -0.37
SHISA3A0PJX4 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHISA3A0PJX4 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms