Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ZNF259P1-201ENST00000407656 1365 ntBASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RCL1Q9Y2P8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 CETN4P-206ENST00000642099 2168 ntBASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 GPS2P2-201ENST00000430745 888 ntBASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 AC015688.4-201ENST00000580780 1647 ntBASIC12.04□□□□□ -0.48
RCL1Q9Y2P8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 REXO1L1P-201ENST00000379010 6598 ntBASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 MCCD1P2-201ENST00000423228 335 ntBASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.03□□□□□ -0.48
RCL1Q9Y2P8 AL353779.1-201ENST00000434793 351 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms