Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 AL138725.1-201ENST00000407347 1314 ntBASIC14.49□□□□□ -0.09
NCDNQ9UBB6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 XBP1P1-201ENST00000436573 652 ntBASIC14.49□□□□□ -0.09
NCDNQ9UBB6 RPL35P9-201ENST00000446059 350 ntBASIC14.49□□□□□ -0.09
NCDNQ9UBB6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 FTLP5-201ENST00000586853 534 ntBASIC14.49□□□□□ -0.09
NCDNQ9UBB6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 AC067930.6-201ENST00000623257 4947 ntBASIC14.49□□□□□ -0.09
NCDNQ9UBB6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NCDNQ9UBB6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TMBIM7P-202ENST00000641474 1516 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 RN7SL494P-201ENST00000461517 304 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 ABHD17AP9-201ENST00000561925 548 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 AC010632.2-201ENST00000588369 1224 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 AC140113.1-201ENST00000603467 169 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 MIR6746-201ENST00000620971 63 ntBASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.48□□□□□ -0.09
NCDNQ9UBB6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NCDNQ9UBB6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NCDNQ9UBB6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.47□□□□□ -0.09
NCDNQ9UBB6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCDNQ9UBB6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 238.6 ms