Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC041040.2-201ENST00000622926 2899 ntBASIC14.91□□□□□ -0.02
HACD3Q9P035 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.91□□□□□ -0.02
HACD3Q9P035 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.91□□□□□ -0.02
HACD3Q9P035 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HACD3Q9P035 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 AC079781.5-202ENST00000641784 3743 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 PUDPP3-201ENST00000445368 636 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 AL355994.2-201ENST00000447882 704 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.9□□□□□ -0.02
HACD3Q9P035 AP003171.2-201ENST00000528208 925 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.9□□□□□ -0.02
HACD3Q9P035 C2orf69P2-201ENST00000562032 1123 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.9□□□□□ -0.02
HACD3Q9P035 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 AC008687.7-202ENST00000637404 953 ntBASIC14.9□□□□□ -0.02
HACD3Q9P035 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HACD3Q9P035 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.9□□□□□ -0.02
HACD3Q9P035 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HACD3Q9P035 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.89□□□□□ -0.03
HACD3Q9P035 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 AGGF1P1-201ENST00000509500 2073 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HACD3Q9P035 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.89□□□□□ -0.03
HACD3Q9P035 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.89□□□□□ -0.03
HACD3Q9P035 AP005482.1-201ENST00000563722 1273 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 AC008825.2-201ENST00000603374 718 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 AC073413.1-201ENST00000603927 732 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 AP001002.3-201ENST00000623482 206 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.89□□□□□ -0.03
HACD3Q9P035 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.89□□□□□ -0.03
HACD3Q9P035 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.89□□□□□ -0.03
HACD3Q9P035 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.89□□□□□ -0.03
HACD3Q9P035 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HACD3Q9P035 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HACD3Q9P035 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms