Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PGAM1P12-201ENST00000505622 748 ntBASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 IGHEP1-201ENST00000521393 651 ntBASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBE2OQ9C0C9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 AC009090.5-201ENST00000624886 2285 ntBASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 PTPN20CP-201ENST00000614090 920 ntBASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2OQ9C0C9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBE2OQ9C0C9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms