Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 RN7SKP175-201ENST00000408472 289 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 RN7SL752P-201ENST00000463779 287 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AC092658.1-201ENST00000505836 891 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AC106886.1-201ENST00000568660 600 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AC025279.2-201ENST00000569730 653 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 AP000593.2-201ENST00000542775 1433 ntBASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF3BQ9BZI7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 MIR658-201ENST00000385210 100 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AL512384.1-201ENST00000406683 331 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 BCRP2-202ENST00000447763 634 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 BCRP6-201ENST00000510112 632 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 BCRP7-201ENST00000511549 544 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AC106820.3-201ENST00000561653 397 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AL590440.2-201ENST00000641973 1595 ntBASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPF3BQ9BZI7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 USP32P1-208ENST00000506594 1164 ntBASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 RAB43P1-201ENST00000561790 589 ntBASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms