Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ATP8A2P2-201ENST00000437678 1568 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC116351.2-201ENST00000606540 1585 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 LETM1P2-201ENST00000597330 2178 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-618P-201ENST00000363518 112 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-1106P-201ENST00000390845 107 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 RNU6-780P-201ENST00000391030 104 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 CISD1P1-201ENST00000393907 327 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AL035419.1-201ENST00000397037 564 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 CALM2P3-201ENST00000400429 449 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 NPM1P12-201ENST00000423757 834 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 Z82205.1-201ENST00000428456 297 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC084871.2-201ENST00000503355 464 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 GPN1-209ENST00000503738 984 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 HSPE1P10-201ENST00000508631 558 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC002070.1-203ENST00000509470 695 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC131206.1-201ENST00000538078 1211 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC107954.1-201ENST00000565906 727 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR4307-201ENST00000582802 84 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 METTL23-213ENST00000591571 585 ntTSL 3 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AC009145.4-201ENST00000625119 1294 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01943-202ENST00000628090 926 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 UXT-AS1-201ENST00000590504 1525 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AL031598.1-201ENST00000561511 1773 ntBASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 C10orf67-201ENST00000323327 2799 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 POLB-201ENST00000265421 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.54□□□□□ -0.88
KRTAP3-3Q9BYR6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 AL121956.1-201ENST00000444219 1548 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
KRTAP3-3Q9BYR6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms