Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PPT1-213ENST00000641319 2388 ntBASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 COL6A4P2-202ENST00000504443 2753 ntBASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HDHD3Q9BSH5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SLC7A15P-201ENST00000424028 1363 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC020910.5-201ENST00000623668 1865 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 RN7SKP230-201ENST00000365642 335 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AL442647.2-201ENST00000429864 857 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC005498.2-205ENST00000593218 784 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AGAP10P-201ENST00000454844 2418 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC090643.2-201ENST00000623442 2029 ntBASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HDHD3Q9BSH5 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms