Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC85AQ96PX6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 CICP14-201ENST00000629111 2732 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 RN7SL555P-201ENST00000584742 339 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 LINC01783-202ENST00000614408 828 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 AC103691.2-201ENST00000618824 433 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 BX284668.2-205ENST00000619677 828 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 AL805961.1-201ENST00000642026 753 ntBASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC85AQ96PX6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 FAM90A2P-201ENST00000511144 1395 ntBASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 FAM90A25P-201ENST00000528404 1395 ntBASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 AL583805.1-201ENST00000391389 531 ntBASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 MIR7845-201ENST00000618396 99 ntBASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC85AQ96PX6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms