Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 MIR1908-201ENST00000410394 80 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 POM121L10P-201ENST00000436994 1285 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 TUBB8P8-201ENST00000458717 1058 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC021723.1-201ENST00000486306 515 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC005586.2-201ENST00000563946 837 ntBASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.17□□□□□ -0.46
GAFA1Q96PS6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC064801.2-201ENST00000625052 1303 ntBASIC12.16□□□□□ -0.46
GAFA1Q96PS6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AL161932.2-201ENST00000435436 679 ntBASIC12.16□□□□□ -0.46
GAFA1Q96PS6 RNMTL1P1-201ENST00000454103 560 ntBASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC007663.3-201ENST00000609632 465 ntBASIC12.16□□□□□ -0.46
GAFA1Q96PS6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AL023803.2-201ENST00000620080 638 ntBASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
GAFA1Q96PS6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.15□□□□□ -0.46
GAFA1Q96PS6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms