Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 MIR1247-201ENST00000408206 136 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AL645933.1-201ENST00000440087 609 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 RPL18P13-201ENST00000478088 569 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC044849.1-201ENST00000519737 1188 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 RN7SL163P-201ENST00000583100 276 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC005324.6-201ENST00000587972 613 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC008805.1-201ENST00000590892 364 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC004923.1-202ENST00000642106 209 ntBASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RPRD1AQ96P16 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 LINC00552-201ENST00000625151 2579 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 MBLAC2-202ENST00000514906 1936 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 GPAA1P2-201ENST00000417923 928 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 TPT1P11-201ENST00000458482 498 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 KRT8P13-201ENST00000463294 1010 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 ZNF767P-206ENST00000513792 565 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 RBM8B-201ENST00000555532 525 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AL451050.2-201ENST00000606967 682 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 AC244093.1-201ENST00000610837 814 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.1■□□□□ 0.01
RPRD1AQ96P16 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPRD1AQ96P16 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms