Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MIR1233-2-201ENST00000408138 82 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MIR1233-1-201ENST00000408722 82 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AC004066.1-201ENST00000502488 802 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AC026150.2-201ENST00000564693 1156 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AC134684.3-201ENST00000641758 218 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MEX3B-202ENST00000558133 4333 ntBASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 AL023775.1-201ENST00000454907 1746 ntBASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP6Q96FZ7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AC015922.1-201ENST00000421102 1152 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AC004967.1-201ENST00000453589 447 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 BANF1P1-201ENST00000553684 263 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 MIR4453-201ENST00000584019 89 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 AC009093.7-201ENST00000623853 1223 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 Z97205.2-201ENST00000564697 1639 ntBASIC14.83□□□□□ -0.04
CHMP6Q96FZ7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms