Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PHF3Q92576 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.21□□□□□ -0.29
PHF3Q92576 AC021723.1-201ENST00000486306 515 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 RCC2P8-201ENST00000502779 1035 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.21□□□□□ -0.29
PHF3Q92576 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 AC103988.2-201ENST00000561804 725 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.21□□□□□ -0.29
PHF3Q92576 AC004923.1-202ENST00000642106 209 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PHF3Q92576 AC020910.5-201ENST00000623668 1865 ntBASIC13.21□□□□□ -0.29
PHF3Q92576 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
PHF3Q92576 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.21□□□□□ -0.3
PHF3Q92576 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PHF3Q92576 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.21□□□□□ -0.3
PHF3Q92576 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.21□□□□□ -0.3
PHF3Q92576 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.21□□□□□ -0.3
PHF3Q92576 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
PHF3Q92576 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PHF3Q92576 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
PHF3Q92576 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 AL354702.1-201ENST00000442006 1960 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.2□□□□□ -0.3
PHF3Q92576 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PHF3Q92576 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PHF3Q92576 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PHF3Q92576 SALL4P5-201ENST00000419001 1760 ntBASIC13.2□□□□□ -0.3
PHF3Q92576 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms