Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MIR326-201ENST00000362220 95 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 AL161932.2-201ENST00000435436 679 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 AL035414.1-201ENST00000451327 857 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 RN7SL769P-201ENST00000469386 295 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.58■□□□□ 0.08
DDX1Q92499 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.58■□□□□ 0.08
DDX1Q92499 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 AP006547.1-201ENST00000563435 692 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 AL136301.1-201ENST00000615830 422 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.58■□□□□ 0.08
DDX1Q92499 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.58■□□□□ 0.08
DDX1Q92499 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.58■□□□□ 0.08
DDX1Q92499 AC068587.6-202ENST00000641839 5619 ntBASIC15.58■□□□□ 0.08
DDX1Q92499 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DDX1Q92499 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
DDX1Q92499 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 BTBD6P1-201ENST00000412176 1267 ntBASIC15.57■□□□□ 0.08
DDX1Q92499 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.57■□□□□ 0.08
DDX1Q92499 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.57■□□□□ 0.08
DDX1Q92499 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.57■□□□□ 0.08
DDX1Q92499 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 AC104506.1-201ENST00000609247 429 ntBASIC15.57■□□□□ 0.08
DDX1Q92499 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.57■□□□□ 0.08
DDX1Q92499 AL008638.5-201ENST00000623814 1298 ntBASIC15.57■□□□□ 0.08
DDX1Q92499 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 E2F3P2-201ENST00000447755 1422 ntBASIC15.57■□□□□ 0.08
DDX1Q92499 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
DDX1Q92499 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DDX1Q92499 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
DDX1Q92499 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms