Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC138466.3-201ENST00000619983 221 ntBASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC44A1Q8WWI5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 CICP20-201ENST00000443330 2801 ntBASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 PUDPP3-201ENST00000445368 636 ntBASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 SPCS2P1-201ENST00000561636 679 ntBASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 AL591122.2-201ENST00000624125 1853 ntBASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC44A1Q8WWI5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC44A1Q8WWI5 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms