Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AL023775.1-201ENST00000454907 1746 ntBASIC17.16■□□□□ 0.34
SMARCC2Q8TAQ2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SMARCC2Q8TAQ2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 KRT8P28-201ENST00000433288 1390 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 MTX1P1-201ENST00000440904 838 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 PFN1P12-201ENST00000455938 534 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 MIR4538-201ENST00000581377 78 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 HSPA8P5-201ENST00000456928 2069 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 KRT8P24-201ENST00000560290 1559 ntBASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMARCC2Q8TAQ2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SMARCC2Q8TAQ2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 AL136309.1-201ENST00000403917 691 ntBASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 GOLGA2P4-201ENST00000441462 777 ntBASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 AC015818.8-201ENST00000587907 1519 ntBASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCC2Q8TAQ2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMARCC2Q8TAQ2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms