Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AL035414.1-201ENST00000451327 857 ntBASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AC022494.1-201ENST00000466044 728 ntBASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AC027237.1-201ENST00000560942 655 ntBASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AC008687.7-202ENST00000637404 953 ntBASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH19Q8TAB3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 MST1P2-201ENST00000457982 2291 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 MIR326-201ENST00000362220 95 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 HOMER2P2-201ENST00000451621 847 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 RN7SL219P-201ENST00000582872 296 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AC011474.4-201ENST00000623523 2076 ntBASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH19Q8TAB3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms