Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SPDYE18-201ENST00000510091 1050 ntBASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PRSS30P-206ENST00000641773 873 ntBASIC13□□□□□ -0.33
DNAAF1Q8NEP3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AC092053.3-201ENST00000641308 4975 ntBASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 AL031595.1-201ENST00000623969 4709 ntBASIC13□□□□□ -0.33
DNAAF1Q8NEP3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
DNAAF1Q8NEP3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AC015818.8-201ENST00000587907 1519 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 DOC2GP-202ENST00000514950 1163 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TPRX2P-201ENST00000535362 881 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AL662799.1-202ENST00000614205 422 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 DMBT1P1-203ENST00000636837 4628 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 AL731571.1-201ENST00000617058 5428 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 FP325330.2-201ENST00000624219 5630 ntBASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms