Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 AL591122.2-201ENST00000624125 1853 ntBASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 PPP1R2P4-201ENST00000424051 595 ntBASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 CDK4P1-201ENST00000454213 828 ntBASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 SIGLEC22P-201ENST00000599104 714 ntBASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 AL512324.3-201ENST00000619383 882 ntBASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.12□□□□□ -0.47
CCDC168Q8NDH2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 MTHFR-217ENST00000641820 1569 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC067930.6-201ENST00000623257 4947 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC010503.4-201ENST00000615487 688 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AP000845.1-201ENST00000581677 2131 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 AC007250.1-201ENST00000608934 338 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 PCDHA12-202ENST00000613593 2588 ntBASIC12.11□□□□□ -0.47
CCDC168Q8NDH2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms