Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS8Q8N3P4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 INTS4P1-203ENST00000641008 3683 ntBASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 AL807761.2-201ENST00000422849 729 ntBASIC22.46■■□□□ 1.19
VPS8Q8N3P4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 ORAOV1P1-201ENST00000503108 395 ntBASIC22.46■■□□□ 1.19
VPS8Q8N3P4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 NDUFB10P1-201ENST00000567319 521 ntBASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SIGLEC18P-201ENST00000602271 909 ntBASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS8Q8N3P4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
VPS8Q8N3P4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
VPS8Q8N3P4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
VPS8Q8N3P4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 AL133467.4-201ENST00000602953 725 ntBASIC22.45■■□□□ 1.18
VPS8Q8N3P4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS8Q8N3P4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 MAGEA5-201ENST00000446757 942 ntBASIC22.44■■□□□ 1.18
VPS8Q8N3P4 FGFR3P1-201ENST00000449999 601 ntBASIC22.44■■□□□ 1.18
VPS8Q8N3P4 MRPL22P1-201ENST00000505398 616 ntBASIC22.44■■□□□ 1.18
VPS8Q8N3P4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AC005740.1-201ENST00000515639 522 ntBASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AC018635.2-201ENST00000608625 364 ntBASIC22.44■■□□□ 1.18
VPS8Q8N3P4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms