Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 AL445250.1-201ENST00000641671 2259 ntBASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LYSMD2Q8IV50 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AL360270.3-201ENST00000609118 1348 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 SPDYE17-201ENST00000412399 783 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 ADH5P3-201ENST00000433842 1137 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 RN7SL589P-201ENST00000481268 310 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 KRT8P48-201ENST00000515599 1220 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 RARRES2P9-201ENST00000565168 469 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 RN7SL510P-201ENST00000581311 263 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AC091812.2-201ENST00000619081 385 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 AC092902.6-201ENST00000641783 218 ntBASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.9□□□□□ -0.34
LYSMD2Q8IV50 PEG13-201ENST00000631594 5667 ntBASIC12.9□□□□□ -0.35
LYSMD2Q8IV50 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
LYSMD2Q8IV50 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
LYSMD2Q8IV50 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 KRT8P35-201ENST00000483942 1338 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 DDX12P-201ENST00000432996 2947 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms