Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 AC006486.2-201ENST00000624246 2199 ntBASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 AGGF1P1-201ENST00000509500 2073 ntBASIC15.52■□□□□ 0.07
NPAS4Q8IUM7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SSR1P1-201ENST00000407630 814 ntBASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AC084752.1-201ENST00000509766 622 ntBASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SORD2P-201ENST00000558556 1069 ntBASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 MIR5196-201ENST00000578146 115 ntBASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 LINC00431-202ENST00000636375 159 ntBASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPAS4Q8IUM7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 PYY2-201ENST00000315776 282 ntBASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 BCAS2P2-201ENST00000425064 674 ntBASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AL133467.4-201ENST00000602953 725 ntBASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AC073347.1-201ENST00000421633 2643 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms