Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 RNU1-114P-201ENST00000365297 166 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 ACTBP8-201ENST00000403258 1108 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 KLF2P2-201ENST00000416807 1039 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 TLE1P1-201ENST00000422965 589 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 AC002472.2-201ENST00000442739 958 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 DUX4L47-201ENST00000566374 394 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 RN7SL204P-201ENST00000582831 262 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HDDC2Q7Z4H3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 HSPA7-201ENST00000445535 1927 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 MIR4745-201ENST00000577608 62 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 AC027307.3-201ENST00000594262 1100 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CU634019.7-201ENST00000624153 1185 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 FP236241.2-201ENST00000624906 1185 ntBASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDDC2Q7Z4H3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms