Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD4Q5XG99 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 PCDHA3-202ENST00000532566 4594 ntBASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AGGF1P1-201ENST00000509500 2073 ntBASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AC002472.4-201ENST00000641915 272 ntBASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD4Q5XG99 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LYSMD4Q5XG99 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 DOC2GP-204ENST00000639052 2548 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ACE3P-201ENST00000423435 1973 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AC008894.3-201ENST00000624324 3103 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 LAP3P2-201ENST00000454686 1454 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AC007326.2-201ENST00000624224 7579 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 GNG10P1-201ENST00000452289 199 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 AL133467.4-201ENST00000602953 725 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 LINC00244-201ENST00000625073 613 ntBASIC14.2□□□□□ -0.14
LYSMD4Q5XG99 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms