Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 AC090505.1-201ENST00000430515 1834 ntBASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 TLE1P1-201ENST00000422965 589 ntBASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AC009477.1-201ENST00000452936 217 ntBASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LCN1P1Q5VSP4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC118758.2-201ENST00000614242 2813 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC004945.1-201ENST00000416738 983 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC007969.1-201ENST00000433675 447 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC135586.1-201ENST00000539323 574 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 DUX4L47-201ENST00000566374 394 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 AC007431.3-201ENST00000623221 587 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 PRSS30P-206ENST00000641773 873 ntBASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCN1P1Q5VSP4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms