Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CBX1P83916 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.32■□□□□ 0.04
CBX1P83916 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC15.32■□□□□ 0.04
CBX1P83916 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC15.32■□□□□ 0.04
CBX1P83916 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
CBX1P83916 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CBX1P83916 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC15.32■□□□□ 0.04
CBX1P83916 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CBX1P83916 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC15.32■□□□□ 0.04
CBX1P83916 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 LINC02486-201ENST00000604157 3000 ntBASIC15.31■□□□□ 0.04
CBX1P83916 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 AC010969.2-201ENST00000602458 3231 ntBASIC15.31■□□□□ 0.04
CBX1P83916 PKP4P1-201ENST00000426801 2158 ntBASIC15.31■□□□□ 0.04
CBX1P83916 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CBX1P83916 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CBX1P83916 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CBX1P83916 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.31■□□□□ 0.04
CBX1P83916 AC012306.2-201ENST00000609350 630 ntBASIC15.31■□□□□ 0.04
CBX1P83916 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 AL589182.2-201ENST00000619332 1049 ntBASIC15.31■□□□□ 0.04
CBX1P83916 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CBX1P83916 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CBX1P83916 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CBX1P83916 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CBX1P83916 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX1P83916 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX1P83916 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CBX1P83916 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CBX1P83916 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CBX1P83916 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX1P83916 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.3■□□□□ 0.04
CBX1P83916 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CBX1P83916 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.3■□□□□ 0.04
CBX1P83916 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX1P83916 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 KRT17P6-201ENST00000453795 1220 ntBASIC15.3■□□□□ 0.04
CBX1P83916 AL359845.1-201ENST00000458202 1648 ntBASIC15.3■□□□□ 0.04
CBX1P83916 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.3■□□□□ 0.04
CBX1P83916 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CBX1P83916 AL136038.3-201ENST00000561909 1096 ntBASIC15.3■□□□□ 0.04
CBX1P83916 MIR4515-201ENST00000584082 81 ntBASIC15.3■□□□□ 0.04
CBX1P83916 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.3■□□□□ 0.04
CBX1P83916 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms