Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 CICP24-201ENST00000605464 2705 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-1P78426 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.04□□□□□ -0.32
NKX6-1P78426 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 TMEM198B-204ENST00000484016 896 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-1P78426 MIR4706-201ENST00000582134 82 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.04□□□□□ -0.32
NKX6-1P78426 U62317.3-201ENST00000608319 855 ntBASIC13.04□□□□□ -0.32
NKX6-1P78426 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.04□□□□□ -0.32
NKX6-1P78426 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.04□□□□□ -0.32
NKX6-1P78426 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.04□□□□□ -0.32
NKX6-1P78426 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NKX6-1P78426 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NKX6-1P78426 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AC005840.4-201ENST00000541242 2494 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 POM121L8P-201ENST00000417732 1281 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX6-1P78426 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.03□□□□□ -0.32
NKX6-1P78426 POM121L9P-203ENST00000441984 1285 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 COX5BP1-201ENST00000507622 393 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 ECM1P1-201ENST00000604092 1279 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 AL137783.1-201ENST00000623494 1896 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AC107918.4-201ENST00000641966 3141 ntBASIC13.03□□□□□ -0.32
NKX6-1P78426 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-1P78426 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-1P78426 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-1P78426 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NKX6-1P78426 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.02□□□□□ -0.32
NKX6-1P78426 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NKX6-1P78426 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.02□□□□□ -0.32
NKX6-1P78426 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms