Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.96□□□□□ -0.33
SEC61A1P61619 AC134915.1-201ENST00000426461 574 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.96□□□□□ -0.33
SEC61A1P61619 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.96□□□□□ -0.33
SEC61A1P61619 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.96□□□□□ -0.33
SEC61A1P61619 AC124283.3-201ENST00000570869 594 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SEC61A1P61619 AC000095.1-201ENST00000603208 874 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 AC133539.2-201ENST00000604757 467 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 CU634019.7-201ENST00000624153 1185 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 FP236241.2-201ENST00000624906 1185 ntBASIC12.96□□□□□ -0.33
SEC61A1P61619 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.96□□□□□ -0.33
SEC61A1P61619 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SEC61A1P61619 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.96□□□□□ -0.34
SEC61A1P61619 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.96□□□□□ -0.34
SEC61A1P61619 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SEC61A1P61619 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.96□□□□□ -0.34
SEC61A1P61619 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SEC61A1P61619 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 KRT8P22-201ENST00000562317 1415 ntBASIC12.96□□□□□ -0.34
SEC61A1P61619 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SEC61A1P61619 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SEC61A1P61619 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SEC61A1P61619 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.95□□□□□ -0.34
SEC61A1P61619 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.95□□□□□ -0.34
SEC61A1P61619 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC015910.1-201ENST00000579400 975 ntBASIC12.95□□□□□ -0.34
SEC61A1P61619 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC008735.3-201ENST00000596646 500 ntBASIC12.95□□□□□ -0.34
SEC61A1P61619 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.95□□□□□ -0.34
SEC61A1P61619 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.95□□□□□ -0.34
SEC61A1P61619 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SEC61A1P61619 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC023090.2-201ENST00000625182 2110 ntBASIC12.95□□□□□ -0.34
SEC61A1P61619 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms