Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPS3AP61247 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.88□□□□□ -0.19
RPS3AP61247 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPS3AP61247 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RPS3AP61247 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 NUS1P3-201ENST00000423502 862 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 ACTG1P3-201ENST00000431775 1114 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.87□□□□□ -0.19
RPS3AP61247 AC004066.1-201ENST00000502488 802 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.87□□□□□ -0.19
RPS3AP61247 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.87□□□□□ -0.19
RPS3AP61247 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.87□□□□□ -0.19
RPS3AP61247 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RPS3AP61247 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 AL645728.2-202ENST00000641679 227 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 AL138799.1-201ENST00000448213 1675 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.87□□□□□ -0.19
RPS3AP61247 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RPS3AP61247 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
RPS3AP61247 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
RPS3AP61247 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 AP000845.1-201ENST00000581677 2131 ntBASIC13.87□□□□□ -0.19
RPS3AP61247 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPS3AP61247 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RPS3AP61247 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 AC130686.1-201ENST00000622936 2466 ntBASIC13.86□□□□□ -0.19
RPS3AP61247 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.86□□□□□ -0.19
RPS3AP61247 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
RPS3AP61247 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.86□□□□□ -0.19
RPS3AP61247 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 KRT43P-201ENST00000434019 910 ntBASIC13.86□□□□□ -0.19
RPS3AP61247 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.86□□□□□ -0.19
RPS3AP61247 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.86□□□□□ -0.19
RPS3AP61247 AP001582.1-201ENST00000525856 295 ntBASIC13.86□□□□□ -0.19
RPS3AP61247 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPS3AP61247 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms