Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 SPTLC1P5-201ENST00000450718 252 ntBASIC16.84■□□□□ 0.29
CHMP4BP1P59074 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 AC245884.6-201ENST00000515672 1067 ntBASIC16.84■□□□□ 0.29
CHMP4BP1P59074 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 AL137783.1-201ENST00000623494 1896 ntBASIC16.84■□□□□ 0.29
CHMP4BP1P59074 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP4BP1P59074 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 LINC01230-201ENST00000625222 3017 ntBASIC16.83■□□□□ 0.29
CHMP4BP1P59074 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP4BP1P59074 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AC016700.1-201ENST00000429424 312 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AL133466.1-201ENST00000447582 150 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AC105129.2-201ENST00000559536 390 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AC106872.11-201ENST00000605838 421 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AL136301.1-201ENST00000615830 422 ntBASIC16.83■□□□□ 0.28
CHMP4BP1P59074 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CHMP4BP1P59074 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.82■□□□□ 0.28
CHMP4BP1P59074 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP4BP1P59074 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms